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alkaline-ml / numpy   python

Repository URL to install this package:

Version: 1.19.1 

/ f2py / f2py2e.py

#!/usr/bin/env python3
"""

f2py2e - Fortran to Python C/API generator. 2nd Edition.
         See __usage__ below.

Copyright 1999--2011 Pearu Peterson all rights reserved,
Pearu Peterson <pearu@cens.ioc.ee>
Permission to use, modify, and distribute this software is given under the
terms of the NumPy License.

NO WARRANTY IS EXPRESSED OR IMPLIED.  USE AT YOUR OWN RISK.
$Date: 2005/05/06 08:31:19 $
Pearu Peterson

"""
import sys
import os
import pprint
import re

from . import crackfortran
from . import rules
from . import cb_rules
from . import auxfuncs
from . import cfuncs
from . import f90mod_rules
from . import __version__
from . import capi_maps

f2py_version = __version__.version
errmess = sys.stderr.write
# outmess=sys.stdout.write
show = pprint.pprint
outmess = auxfuncs.outmess

try:
    from numpy import __version__ as numpy_version
except ImportError:
    numpy_version = 'N/A'

__usage__ = """\
Usage:

1) To construct extension module sources:

      f2py [<options>] <fortran files> [[[only:]||[skip:]] \\
                                        <fortran functions> ] \\
                                       [: <fortran files> ...]

2) To compile fortran files and build extension modules:

      f2py -c [<options>, <build_flib options>, <extra options>] <fortran files>

3) To generate signature files:

      f2py -h <filename.pyf> ...< same options as in (1) >

Description: This program generates a Python C/API file (<modulename>module.c)
             that contains wrappers for given fortran functions so that they
             can be called from Python. With the -c option the corresponding
             extension modules are built.

Options:

  --2d-numpy       Use numpy.f2py tool with NumPy support. [DEFAULT]
  --2d-numeric     Use f2py2e tool with Numeric support.
  --2d-numarray    Use f2py2e tool with Numarray support.
  --g3-numpy       Use 3rd generation f2py from the separate f2py package.
                   [NOT AVAILABLE YET]

  -h <filename>    Write signatures of the fortran routines to file <filename>
                   and exit. You can then edit <filename> and use it instead
                   of <fortran files>. If <filename>==stdout then the
                   signatures are printed to stdout.
  <fortran functions>  Names of fortran routines for which Python C/API
                   functions will be generated. Default is all that are found
                   in <fortran files>.
  <fortran files>  Paths to fortran/signature files that will be scanned for
                   <fortran functions> in order to determine their signatures.
  skip:            Ignore fortran functions that follow until `:'.
  only:            Use only fortran functions that follow until `:'.
  :                Get back to <fortran files> mode.

  -m <modulename>  Name of the module; f2py generates a Python/C API
                   file <modulename>module.c or extension module <modulename>.
                   Default is 'untitled'.

  --[no-]lower     Do [not] lower the cases in <fortran files>. By default,
                   --lower is assumed with -h key, and --no-lower without -h key.

  --build-dir <dirname>  All f2py generated files are created in <dirname>.
                   Default is tempfile.mkdtemp().

  --overwrite-signature  Overwrite existing signature file.

  --[no-]latex-doc Create (or not) <modulename>module.tex.
                   Default is --no-latex-doc.
  --short-latex    Create 'incomplete' LaTeX document (without commands
                   \\documentclass, \\tableofcontents, and \\begin{document},
                   \\end{document}).

  --[no-]rest-doc Create (or not) <modulename>module.rst.
                   Default is --no-rest-doc.

  --debug-capi     Create C/API code that reports the state of the wrappers
                   during runtime. Useful for debugging.

  --[no-]wrap-functions    Create Fortran subroutine wrappers to Fortran 77
                   functions. --wrap-functions is default because it ensures
                   maximum portability/compiler independence.

  --include-paths <path1>:<path2>:...   Search include files from the given
                   directories.

  --help-link [..] List system resources found by system_info.py. See also
                   --link-<resource> switch below. [..] is optional list
                   of resources names. E.g. try 'f2py --help-link lapack_opt'.

  --f2cmap <filename>  Load Fortran-to-Python KIND specification from the given
                   file. Default: .f2py_f2cmap in current directory.

  --quiet          Run quietly.
  --verbose        Run with extra verbosity.
  -v               Print f2py version ID and exit.


numpy.distutils options (only effective with -c):

  --fcompiler=         Specify Fortran compiler type by vendor
  --compiler=          Specify C compiler type (as defined by distutils)

  --help-fcompiler     List available Fortran compilers and exit
  --f77exec=           Specify the path to F77 compiler
  --f90exec=           Specify the path to F90 compiler
  --f77flags=          Specify F77 compiler flags
  --f90flags=          Specify F90 compiler flags
  --opt=               Specify optimization flags
  --arch=              Specify architecture specific optimization flags
  --noopt              Compile without optimization
  --noarch             Compile without arch-dependent optimization
  --debug              Compile with debugging information

Extra options (only effective with -c):

  --link-<resource>    Link extension module with <resource> as defined
                       by numpy.distutils/system_info.py. E.g. to link
                       with optimized LAPACK libraries (vecLib on MacOSX,
                       ATLAS elsewhere), use --link-lapack_opt.
                       See also --help-link switch.

  -L/path/to/lib/ -l<libname>
  -D<define> -U<name>
  -I/path/to/include/
  <filename>.o <filename>.so <filename>.a

  Using the following macros may be required with non-gcc Fortran
  compilers:
    -DPREPEND_FORTRAN -DNO_APPEND_FORTRAN -DUPPERCASE_FORTRAN
    -DUNDERSCORE_G77

  When using -DF2PY_REPORT_ATEXIT, a performance report of F2PY
  interface is printed out at exit (platforms: Linux).

  When using -DF2PY_REPORT_ON_ARRAY_COPY=<int>, a message is
  sent to stderr whenever F2PY interface makes a copy of an
  array. Integer <int> sets the threshold for array sizes when
  a message should be shown.

Version:     %s
numpy Version: %s
Requires:    Python 3.5 or higher.
License:     NumPy license (see LICENSE.txt in the NumPy source code)
Copyright 1999 - 2011 Pearu Peterson all rights reserved.
http://cens.ioc.ee/projects/f2py2e/""" % (f2py_version, numpy_version)


def scaninputline(inputline):
    files, skipfuncs, onlyfuncs, debug = [], [], [], []
    f, f2, f3, f5, f6, f7, f8, f9, f10 = 1, 0, 0, 0, 0, 0, 0, 0, 0
    verbose = 1
    dolc = -1
    dolatexdoc = 0
    dorestdoc = 0
    wrapfuncs = 1
    buildpath = '.'
    include_paths = []
    signsfile, modulename = None, None
    options = {'buildpath': buildpath,
               'coutput': None,
               'f2py_wrapper_output': None}
    for l in inputline:
        if l == '':
            pass
        elif l == 'only:':
            f = 0
        elif l == 'skip:':
            f = -1
        elif l == ':':
            f = 1
        elif l[:8] == '--debug-':
            debug.append(l[8:])
        elif l == '--lower':
            dolc = 1
        elif l == '--build-dir':
            f6 = 1
        elif l == '--no-lower':
            dolc = 0
        elif l == '--quiet':
            verbose = 0
        elif l == '--verbose':
            verbose += 1
        elif l == '--latex-doc':
            dolatexdoc = 1
        elif l == '--no-latex-doc':
            dolatexdoc = 0
        elif l == '--rest-doc':
            dorestdoc = 1
        elif l == '--no-rest-doc':
            dorestdoc = 0
        elif l == '--wrap-functions':
            wrapfuncs = 1
        elif l == '--no-wrap-functions':
            wrapfuncs = 0
        elif l == '--short-latex':
            options['shortlatex'] = 1
        elif l == '--coutput':
            f8 = 1
        elif l == '--f2py-wrapper-output':
            f9 = 1
        elif l == '--f2cmap':
            f10 = 1
        elif l == '--overwrite-signature':
            options['h-overwrite'] = 1
        elif l == '-h':
            f2 = 1
        elif l == '-m':
            f3 = 1
        elif l[:2] == '-v':
            print(f2py_version)
            sys.exit()
        elif l == '--show-compilers':
            f5 = 1
        elif l[:8] == '-include':
            cfuncs.outneeds['userincludes'].append(l[9:-1])
            cfuncs.userincludes[l[9:-1]] = '#include ' + l[8:]
        elif l[:15] in '--include_paths':
            outmess(
                'f2py option --include_paths is deprecated, use --include-paths instead.\n')
            f7 = 1
        elif l[:15] in '--include-paths':
            f7 = 1
        elif l[0] == '-':
            errmess('Unknown option %s\n' % repr(l))
            sys.exit()
        elif f2:
            f2 = 0
            signsfile = l
        elif f3:
            f3 = 0
            modulename = l
        elif f6:
            f6 = 0
            buildpath = l
        elif f7:
            f7 = 0
            include_paths.extend(l.split(os.pathsep))
        elif f8:
            f8 = 0
            options["coutput"] = l
        elif f9:
            f9 = 0
            options["f2py_wrapper_output"] = l
        elif f10:
            f10 = 0
            options["f2cmap_file"] = l
        elif f == 1:
            try:
                with open(l):
                    pass
                files.append(l)
            except IOError as detail:
                errmess('IOError: %s. Skipping file "%s".\n' %
                        (str(detail), l))
        elif f == -1:
            skipfuncs.append(l)
        elif f == 0:
            onlyfuncs.append(l)
    if not f5 and not files and not modulename:
        print(__usage__)
        sys.exit()
    if not os.path.isdir(buildpath):
        if not verbose:
            outmess('Creating build directory %s' % (buildpath))
        os.mkdir(buildpath)
    if signsfile:
        signsfile = os.path.join(buildpath, signsfile)
    if signsfile and os.path.isfile(signsfile) and 'h-overwrite' not in options:
        errmess(
            'Signature file "%s" exists!!! Use --overwrite-signature to overwrite.\n' % (signsfile))
        sys.exit()

    options['debug'] = debug
    options['verbose'] = verbose
    if dolc == -1 and not signsfile:
        options['do-lower'] = 0
    else:
        options['do-lower'] = dolc
    if modulename:
        options['module'] = modulename
    if signsfile:
        options['signsfile'] = signsfile
    if onlyfuncs:
        options['onlyfuncs'] = onlyfuncs
    if skipfuncs:
        options['skipfuncs'] = skipfuncs
    options['dolatexdoc'] = dolatexdoc
    options['dorestdoc'] = dorestdoc
    options['wrapfuncs'] = wrapfuncs
    options['buildpath'] = buildpath
    options['include_paths'] = include_paths
    options.setdefault('f2cmap_file', None)
    return files, options


def callcrackfortran(files, options):
    rules.options = options
    crackfortran.debug = options['debug']
    crackfortran.verbose = options['verbose']
    if 'module' in options:
        crackfortran.f77modulename = options['module']
    if 'skipfuncs' in options:
        crackfortran.skipfuncs = options['skipfuncs']
    if 'onlyfuncs' in options:
        crackfortran.onlyfuncs = options['onlyfuncs']
    crackfortran.include_paths[:] = options['include_paths']
    crackfortran.dolowercase = options['do-lower']
    postlist = crackfortran.crackfortran(files)
    if 'signsfile' in options:
        outmess('Saving signatures to file "%s"\n' % (options['signsfile']))
        pyf = crackfortran.crack2fortran(postlist)
        if options['signsfile'][-6:] == 'stdout':
            sys.stdout.write(pyf)
        else:
            with open(options['signsfile'], 'w') as f:
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