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Version:
2.1 ▾
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#!/usr/bin/env python
from nose.tools import *
from networkx.testing import assert_edges_equal
import networkx as nx
from test_multigraph import BaseMultiGraphTester, TestMultiGraph
from test_multigraph import TestEdgeSubgraph as TestMultiGraphEdgeSubgraph
class BaseMultiDiGraphTester(BaseMultiGraphTester):
def test_edges(self):
G = self.K3
edges = [(0, 1), (0, 2), (1, 0), (1, 2), (2, 0), (2, 1)]
assert_equal(sorted(G.edges()), edges)
assert_equal(sorted(G.edges(0)), [(0, 1), (0, 2)])
assert_raises((KeyError, nx.NetworkXError), G.edges, -1)
def test_edges_data(self):
G = self.K3
edges = [(0, 1, {}), (0, 2, {}), (1, 0, {}),
(1, 2, {}), (2, 0, {}), (2, 1, {})]
assert_equal(sorted(G.edges(data=True)), edges)
assert_equal(sorted(G.edges(0, data=True)), [(0, 1, {}), (0, 2, {})])
assert_raises((KeyError, nx.NetworkXError), G.neighbors, -1)
def test_edges(self):
G = self.K3
assert_equal(sorted(G.edges()),
[(0, 1), (0, 2), (1, 0), (1, 2), (2, 0), (2, 1)])
assert_equal(sorted(G.edges(0)), [(0, 1), (0, 2)])
G.add_edge(0, 1)
assert_equal(sorted(G.edges()),
[(0, 1), (0, 1), (0, 2), (1, 0), (1, 2), (2, 0), (2, 1)])
def test_out_edges(self):
G = self.K3
assert_equal(sorted(G.out_edges()),
[(0, 1), (0, 2), (1, 0), (1, 2), (2, 0), (2, 1)])
assert_equal(sorted(G.out_edges(0)), [(0, 1), (0, 2)])
assert_raises((KeyError, nx.NetworkXError), G.out_edges, -1)
assert_equal(sorted(G.out_edges(0, keys=True)), [(0, 1, 0), (0, 2, 0)])
def test_out_edges(self):
G = self.K3
assert_equal(sorted(G.out_edges()),
[(0, 1), (0, 2), (1, 0), (1, 2), (2, 0), (2, 1)])
assert_equal(sorted(G.out_edges(0)), [(0, 1), (0, 2)])
G.add_edge(0, 1, 2)
assert_equal(sorted(G.out_edges()),
[(0, 1), (0, 1), (0, 2), (1, 0), (1, 2), (2, 0), (2, 1)])
def test_out_edges_data(self):
G = self.K3
assert_equal(sorted(G.edges(0, data=True)), [(0, 1, {}), (0, 2, {})])
G.remove_edge(0, 1)
G.add_edge(0, 1, data=1)
assert_equal(sorted(G.edges(0, data=True)),
[(0, 1, {'data': 1}), (0, 2, {})])
assert_equal(sorted(G.edges(0, data='data')),
[(0, 1, 1), (0, 2, None)])
assert_equal(sorted(G.edges(0, data='data', default=-1)),
[(0, 1, 1), (0, 2, -1)])
def test_in_edges(self):
G = self.K3
assert_equal(sorted(G.in_edges()),
[(0, 1), (0, 2), (1, 0), (1, 2), (2, 0), (2, 1)])
assert_equal(sorted(G.in_edges(0)), [(1, 0), (2, 0)])
assert_raises((KeyError, nx.NetworkXError), G.in_edges, -1)
G.add_edge(0, 1, 2)
assert_equal(sorted(G.in_edges()),
[(0, 1), (0, 1), (0, 2), (1, 0), (1, 2), (2, 0), (2, 1)])
assert_equal(sorted(G.in_edges(0, keys=True)), [(1, 0, 0), (2, 0, 0)])
def test_in_edges(self):
G = self.K3
assert_equal(sorted(G.in_edges()),
[(0, 1), (0, 2), (1, 0), (1, 2), (2, 0), (2, 1)])
assert_equal(sorted(G.in_edges(0)), [(1, 0), (2, 0)])
G.add_edge(0, 1, 2)
assert_equal(sorted(G.in_edges()),
[(0, 1), (0, 1), (0, 2), (1, 0), (1, 2), (2, 0), (2, 1)])
assert_equal(sorted(G.in_edges(data=True, keys=False)),
[(0, 1, {}), (0, 1, {}), (0, 2, {}), (1, 0, {}),
(1, 2, {}), (2, 0, {}), (2, 1, {})])
def test_in_edges_data(self):
G = self.K3
assert_equal(sorted(G.in_edges(0, data=True)),
[(1, 0, {}), (2, 0, {})])
G.remove_edge(1, 0)
G.add_edge(1, 0, data=1)
assert_equal(sorted(G.in_edges(0, data=True)),
[(1, 0, {'data': 1}), (2, 0, {})])
assert_equal(sorted(G.in_edges(0, data='data')),
[(1, 0, 1), (2, 0, None)])
assert_equal(sorted(G.in_edges(0, data='data', default=-1)),
[(1, 0, 1), (2, 0, -1)])
def is_shallow(self, H, G):
# graph
assert_equal(G.graph['foo'], H.graph['foo'])
G.graph['foo'].append(1)
assert_equal(G.graph['foo'], H.graph['foo'])
# node
assert_equal(G.nodes[0]['foo'], H.nodes[0]['foo'])
G.nodes[0]['foo'].append(1)
assert_equal(G.nodes[0]['foo'], H.nodes[0]['foo'])
# edge
assert_equal(G[1][2][0]['foo'], H[1][2][0]['foo'])
G[1][2][0]['foo'].append(1)
assert_equal(G[1][2][0]['foo'], H[1][2][0]['foo'])
def is_deep(self, H, G):
# graph
assert_equal(G.graph['foo'], H.graph['foo'])
G.graph['foo'].append(1)
assert_not_equal(G.graph['foo'], H.graph['foo'])
# node
assert_equal(G.nodes[0]['foo'], H.nodes[0]['foo'])
G.nodes[0]['foo'].append(1)
assert_not_equal(G.nodes[0]['foo'], H.nodes[0]['foo'])
# edge
assert_equal(G[1][2][0]['foo'], H[1][2][0]['foo'])
G[1][2][0]['foo'].append(1)
assert_not_equal(G[1][2][0]['foo'], H[1][2][0]['foo'])
def test_to_undirected(self):
# MultiDiGraph -> MultiGraph changes number of edges so it is
# not a copy operation... use is_shallow, not is_shallow_copy
G = self.K3
self.add_attributes(G)
H = nx.MultiGraph(G)
# self.is_shallow(H,G)
# the result is traversal order dependent so we
# can't use the is_shallow() test here.
try:
assert_edges_equal(H.edges(), [(0, 1), (1, 2), (2, 0)])
except AssertionError:
assert_edges_equal(H.edges(), [(0, 1), (1, 2), (1, 2), (2, 0)])
H = G.to_undirected()
self.is_deep(H, G)
def test_has_successor(self):
G = self.K3
assert_equal(G.has_successor(0, 1), True)
assert_equal(G.has_successor(0, -1), False)
def test_successors(self):
G = self.K3
assert_equal(sorted(G.successors(0)), [1, 2])
assert_raises((KeyError, nx.NetworkXError), G.successors, -1)
def test_has_predecessor(self):
G = self.K3
assert_equal(G.has_predecessor(0, 1), True)
assert_equal(G.has_predecessor(0, -1), False)
def test_predecessors(self):
G = self.K3
assert_equal(sorted(G.predecessors(0)), [1, 2])
assert_raises((KeyError, nx.NetworkXError), G.predecessors, -1)
def test_degree(self):
G = self.K3
assert_equal(sorted(G.degree()), [(0, 4), (1, 4), (2, 4)])
assert_equal(dict(G.degree()), {0: 4, 1: 4, 2: 4})
assert_equal(G.degree(0), 4)
assert_equal(list(G.degree(iter([0]))), [(0, 4)])
G.add_edge(0, 1, weight=0.3, other=1.2)
assert_equal(sorted(G.degree(weight='weight')),
[(0, 4.3), (1, 4.3), (2, 4)])
assert_equal(sorted(G.degree(weight='other')),
[(0, 5.2), (1, 5.2), (2, 4)])
def test_in_degree(self):
G = self.K3
assert_equal(sorted(G.in_degree()), [(0, 2), (1, 2), (2, 2)])
assert_equal(dict(G.in_degree()), {0: 2, 1: 2, 2: 2})
assert_equal(G.in_degree(0), 2)
assert_equal(list(G.in_degree(iter([0]))), [(0, 2)])
assert_equal(G.in_degree(0, weight='weight'), 2)
def test_out_degree(self):
G = self.K3
assert_equal(sorted(G.out_degree()), [(0, 2), (1, 2), (2, 2)])
assert_equal(dict(G.out_degree()), {0: 2, 1: 2, 2: 2})
assert_equal(G.out_degree(0), 2)
assert_equal(list(G.out_degree(iter([0]))), [(0, 2)])
assert_equal(G.out_degree(0, weight='weight'), 2)
def test_size(self):
G = self.K3
assert_equal(G.size(), 6)
assert_equal(G.number_of_edges(), 6)
G.add_edge(0, 1, weight=0.3, other=1.2)
assert_equal(round(G.size(weight='weight'), 2), 6.3)
assert_equal(round(G.size(weight='other'), 2), 7.2)
def test_to_undirected_reciprocal(self):
G = self.Graph()
G.add_edge(1, 2)
assert_true(G.to_undirected().has_edge(1, 2))
assert_false(G.to_undirected(reciprocal=True).has_edge(1, 2))
G.add_edge(2, 1)
assert_true(G.to_undirected(reciprocal=True).has_edge(1, 2))
def test_reverse_copy(self):
G = nx.MultiDiGraph([(0, 1), (0, 1)])
R = G.reverse()
assert_equal(sorted(R.edges()), [(1, 0), (1, 0)])
R.remove_edge(1, 0)
assert_equal(sorted(R.edges()), [(1, 0)])
assert_equal(sorted(G.edges()), [(0, 1), (0, 1)])
def test_reverse_nocopy(self):
G = nx.MultiDiGraph([(0, 1), (0, 1)])
R = G.reverse(copy=False)
assert_equal(sorted(R.edges()), [(1, 0), (1, 0)])
assert_raises(nx.NetworkXError, R.remove_edge, 1, 0)
class TestMultiDiGraph(BaseMultiDiGraphTester, TestMultiGraph):
def setUp(self):
self.Graph = nx.MultiDiGraph
# build K3
self.k3edges = [(0, 1), (0, 2), (1, 2)]
self.k3nodes = [0, 1, 2]
self.K3 = self.Graph()
self.K3._adj = {0: {}, 1: {}, 2: {}}
self.K3._succ = self.K3._adj
self.K3._pred = {0: {}, 1: {}, 2: {}}
for u in self.k3nodes:
for v in self.k3nodes:
if u == v:
continue
d = {0: {}}
self.K3._succ[u][v] = d
self.K3._pred[v][u] = d
self.K3._node = {}
self.K3._node[0] = {}
self.K3._node[1] = {}
self.K3._node[2] = {}
def test_add_edge(self):
G = self.Graph()
G.add_edge(0, 1)
assert_equal(G._adj, {0: {1: {0: {}}}, 1: {}})
assert_equal(G._succ, {0: {1: {0: {}}}, 1: {}})
assert_equal(G._pred, {0: {}, 1: {0: {0: {}}}})
G = self.Graph()
G.add_edge(*(0, 1))
assert_equal(G._adj, {0: {1: {0: {}}}, 1: {}})
assert_equal(G._succ, {0: {1: {0: {}}}, 1: {}})
assert_equal(G._pred, {0: {}, 1: {0: {0: {}}}})
def test_add_edges_from(self):
G = self.Graph()
G.add_edges_from([(0, 1), (0, 1, {'weight': 3})])
assert_equal(G._adj, {0: {1: {0: {}, 1: {'weight': 3}}}, 1: {}})
assert_equal(G._succ, {0: {1: {0: {}, 1: {'weight': 3}}}, 1: {}})
assert_equal(G._pred, {0: {}, 1: {0: {0: {}, 1: {'weight': 3}}}})
G.add_edges_from([(0, 1), (0, 1, {'weight': 3})], weight=2)
assert_equal(G._succ, {0: {1: {0: {},
1: {'weight': 3},
2: {'weight': 2},
3: {'weight': 3}}},
1: {}})
assert_equal(G._pred, {0: {}, 1: {0: {0: {}, 1: {'weight': 3},
2: {'weight': 2},
3: {'weight': 3}}}})
G = self.Graph()
edges = [(0, 1, {'weight': 3}), (0, 1, (('weight', 2),)),
(0, 1, 5), (0, 1, 's')]
G.add_edges_from(edges)
keydict = {0: {'weight': 3}, 1: {'weight': 2}, 5: {}, 's': {}}
assert_equal(G._succ, {0: {1: keydict}, 1: {}})
assert_equal(G._pred, {1: {0: keydict}, 0: {}})
# too few in tuple
assert_raises(nx.NetworkXError, G.add_edges_from, [(0,)])
# too many in tuple
assert_raises(nx.NetworkXError, G.add_edges_from, [(0, 1, 2, 3, 4)])
# not a tuple
assert_raises(TypeError, G.add_edges_from, [0])
def test_remove_edge(self):
G = self.K3
G.remove_edge(0, 1)
assert_equal(G._succ, {0: {2: {0: {}}},
1: {0: {0: {}}, 2: {0: {}}},
2: {0: {0: {}}, 1: {0: {}}}})
assert_equal(G._pred, {0: {1: {0: {}}, 2: {0: {}}},
1: {2: {0: {}}},
2: {0: {0: {}}, 1: {0: {}}}})
assert_raises((KeyError, nx.NetworkXError), G.remove_edge, -1, 0)
assert_raises((KeyError, nx.NetworkXError), G.remove_edge, 0, 2,
key=1)
def test_remove_multiedge(self):
G = self.K3
G.add_edge(0, 1, key='parallel edge')
G.remove_edge(0, 1, key='parallel edge')
assert_equal(G._adj, {0: {1: {0: {}}, 2: {0: {}}},
1: {0: {0: {}}, 2: {0: {}}},
2: {0: {0: {}}, 1: {0: {}}}})
assert_equal(G._succ, {0: {1: {0: {}}, 2: {0: {}}},
1: {0: {0: {}}, 2: {0: {}}},
2: {0: {0: {}}, 1: {0: {}}}})
assert_equal(G._pred, {0: {1: {0: {}}, 2: {0: {}}},
1: {0: {0: {}}, 2: {0: {}}},
2: {0: {0: {}}, 1: {0: {}}}})
G.remove_edge(0, 1)
assert_equal(G._succ, {0: {2: {0: {}}},
1: {0: {0: {}}, 2: {0: {}}},
2: {0: {0: {}}, 1: {0: {}}}})
assert_equal(G._pred, {0: {1: {0: {}}, 2: {0: {}}},
1: {2: {0: {}}},
2: {0: {0: {}}, 1: {0: {}}}})
assert_raises((KeyError, nx.NetworkXError), G.remove_edge, -1, 0)
def test_remove_edges_from(self):
G = self.K3
G.remove_edges_from([(0, 1)])
assert_equal(G._succ, {0: {2: {0: {}}},
1: {0: {0: {}}, 2: {0: {}}},
2: {0: {0: {}}, 1: {0: {}}}})
assert_equal(G._pred, {0: {1: {0: {}}, 2: {0: {}}},
1: {2: {0: {}}},
2: {0: {0: {}}, 1: {0: {}}}})
G.remove_edges_from([(0, 0)]) # silent fail
class TestEdgeSubgraph(TestMultiGraphEdgeSubgraph):
"""Unit tests for the :meth:`MultiDiGraph.edge_subgraph` method."""
def setup(self):
# Create a quadruply-linked path graph on five nodes.
G = nx.MultiDiGraph()
nx.add_path(G, range(5))
nx.add_path(G, range(5))
nx.add_path(G, reversed(range(5)))
nx.add_path(G, reversed(range(5)))
# Add some node, edge, and graph attributes.
for i in range(5):
G.nodes[i]['name'] = 'node{}'.format(i)
G.adj[0][1][0]['name'] = 'edge010'
G.adj[0][1][1]['name'] = 'edge011'
G.adj[3][4][0]['name'] = 'edge340'
G.adj[3][4][1]['name'] = 'edge341'
G.graph['name'] = 'graph'
# Get the subgraph induced by one of the first edges and one of
# the last edges.
self.G = G
self.H = G.edge_subgraph([(0, 1, 0), (3, 4, 1)])