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#!/usr/bin/env python
from nose.tools import assert_equal
from nose.tools import assert_is
from nose.tools import assert_not_equal
from nose.tools import assert_raises
import networkx as nx
from networkx.testing.utils import *
from test_graph import BaseAttrGraphTester, TestGraph
class BaseMultiGraphTester(BaseAttrGraphTester):
def test_has_edge(self):
G = self.K3
assert_equal(G.has_edge(0, 1), True)
assert_equal(G.has_edge(0, -1), False)
assert_equal(G.has_edge(0, 1, 0), True)
assert_equal(G.has_edge(0, 1, 1), False)
def test_get_edge_data(self):
G = self.K3
assert_equal(G.get_edge_data(0, 1), {0: {}})
assert_equal(G[0][1], {0: {}})
assert_equal(G[0][1][0], {})
assert_equal(G.get_edge_data(10, 20), None)
assert_equal(G.get_edge_data(0, 1, 0), {})
def test_adjacency(self):
G = self.K3
assert_equal(dict(G.adjacency()),
{0: {1: {0: {}}, 2: {0: {}}},
1: {0: {0: {}}, 2: {0: {}}},
2: {0: {0: {}}, 1: {0: {}}}})
def deepcopy_edge_attr(self, H, G):
assert_equal(G[1][2][0]['foo'], H[1][2][0]['foo'])
G[1][2][0]['foo'].append(1)
assert_not_equal(G[1][2][0]['foo'], H[1][2][0]['foo'])
def shallow_copy_edge_attr(self, H, G):
assert_equal(G[1][2][0]['foo'], H[1][2][0]['foo'])
G[1][2][0]['foo'].append(1)
assert_equal(G[1][2][0]['foo'], H[1][2][0]['foo'])
def graphs_equal(self, H, G):
assert_equal(G._adj, H._adj)
assert_equal(G._node, H._node)
assert_equal(G.graph, H.graph)
assert_equal(G.name, H.name)
if not G.is_directed() and not H.is_directed():
assert_is(H._adj[1][2][0], H._adj[2][1][0])
assert_is(G._adj[1][2][0], G._adj[2][1][0])
else: # at least one is directed
if not G.is_directed():
G._pred = G._adj
G._succ = G._adj
if not H.is_directed():
H._pred = H._adj
H._succ = H._adj
assert_equal(G._pred, H._pred)
assert_equal(G._succ, H._succ)
assert_is(H._succ[1][2][0], H._pred[2][1][0])
assert_is(G._succ[1][2][0], G._pred[2][1][0])
def same_attrdict(self, H, G):
# same attrdict in the edgedata
old_foo = H[1][2][0]['foo']
H.adj[1][2][0]['foo'] = 'baz'
assert_equal(G._adj, H._adj)
H.adj[1][2][0]['foo'] = old_foo
assert_equal(G._adj, H._adj)
old_foo = H.nodes[0]['foo']
H.nodes[0]['foo'] = 'baz'
assert_equal(G._node, H._node)
H.nodes[0]['foo'] = old_foo
assert_equal(G._node, H._node)
def different_attrdict(self, H, G):
# used by graph_equal_but_different
old_foo = H[1][2][0]['foo']
H.adj[1][2][0]['foo'] = 'baz'
assert_not_equal(G._adj, H._adj)
H.adj[1][2][0]['foo'] = old_foo
assert_equal(G._adj, H._adj)
old_foo = H.nodes[0]['foo']
H.nodes[0]['foo'] = 'baz'
assert_not_equal(G._node, H._node)
H.nodes[0]['foo'] = old_foo
assert_equal(G._node, H._node)
def test_to_undirected(self):
G = self.K3
self.add_attributes(G)
H = nx.MultiGraph(G)
self.is_shallow_copy(H, G)
H = G.to_undirected()
self.is_deepcopy(H, G)
def test_to_directed(self):
G = self.K3
self.add_attributes(G)
H = nx.MultiDiGraph(G)
self.is_shallow_copy(H, G)
H = G.to_directed()
self.is_deepcopy(H, G)
def test_number_of_edges_selfloops(self):
G = self.K3
G.add_edge(0, 0)
G.add_edge(0, 0)
G.add_edge(0, 0, key='parallel edge')
G.remove_edge(0, 0, key='parallel edge')
assert_equal(G.number_of_edges(0, 0), 2)
G.remove_edge(0, 0)
assert_equal(G.number_of_edges(0, 0), 1)
def test_edge_lookup(self):
G = self.Graph()
G.add_edge(1, 2, foo='bar')
G.add_edge(1, 2, 'key', foo='biz')
assert_edges_equal(G.edges[1, 2, 0], {'foo': 'bar'})
assert_edges_equal(G.edges[1, 2, 'key'], {'foo': 'biz'})
def test_edge_attr4(self):
G = self.Graph()
G.add_edge(1, 2, key=0, data=7, spam='bar', bar='foo')
assert_edges_equal(G.edges(data=True),
[(1, 2, {'data': 7, 'spam': 'bar', 'bar': 'foo'})])
G[1][2][0]['data'] = 10 # OK to set data like this
assert_edges_equal(G.edges(data=True),
[(1, 2, {'data': 10, 'spam': 'bar', 'bar': 'foo'})])
G.adj[1][2][0]['data'] = 20
assert_edges_equal(G.edges(data=True),
[(1, 2, {'data': 20, 'spam': 'bar', 'bar': 'foo'})])
G.edges[1, 2, 0]['data'] = 21 # another spelling, "edge"
assert_edges_equal(G.edges(data=True),
[(1, 2, {'data': 21, 'spam': 'bar', 'bar': 'foo'})])
G.adj[1][2][0]['listdata'] = [20, 200]
G.adj[1][2][0]['weight'] = 20
assert_edges_equal(G.edges(data=True),
[(1, 2, {'data': 21, 'spam': 'bar', 'bar': 'foo',
'listdata': [20, 200], 'weight':20})])
class TestMultiGraph(BaseMultiGraphTester, TestGraph):
def setUp(self):
self.Graph = nx.MultiGraph
# build K3
ed1, ed2, ed3 = ({0: {}}, {0: {}}, {0: {}})
self.k3adj = {0: {1: ed1, 2: ed2},
1: {0: ed1, 2: ed3},
2: {0: ed2, 1: ed3}}
self.k3edges = [(0, 1), (0, 2), (1, 2)]
self.k3nodes = [0, 1, 2]
self.K3 = self.Graph()
self.K3._adj = self.k3adj
self.K3._node = {}
self.K3._node[0] = {}
self.K3._node[1] = {}
self.K3._node[2] = {}
def test_data_input(self):
G = self.Graph({1: [2], 2: [1]}, name="test")
assert_equal(G.name, "test")
expected = [(1, {2: {0: {}}}), (2, {1: {0: {}}})]
assert_equal(sorted(G.adj.items()), expected)
def test_getitem(self):
G = self.K3
assert_equal(G[0], {1: {0: {}}, 2: {0: {}}})
assert_raises(KeyError, G.__getitem__, 'j')
assert_raises((TypeError, nx.NetworkXError), G.__getitem__, ['A'])
def test_remove_node(self):
G = self.K3
G.remove_node(0)
assert_equal(G.adj, {1: {2: {0: {}}}, 2: {1: {0: {}}}})
assert_raises((KeyError, nx.NetworkXError), G.remove_node, -1)
def test_add_edge(self):
G = self.Graph()
G.add_edge(0, 1)
assert_equal(G.adj, {0: {1: {0: {}}}, 1: {0: {0: {}}}})
G = self.Graph()
G.add_edge(*(0, 1))
assert_equal(G.adj, {0: {1: {0: {}}}, 1: {0: {0: {}}}})
def test_add_edge_conflicting_key(self):
G = self.Graph()
G.add_edge(0, 1, key=1)
G.add_edge(0, 1)
assert_equal(G.number_of_edges(), 2)
G = self.Graph()
G.add_edges_from([(0, 1, 1, {})])
G.add_edges_from([(0, 1)])
assert_equal(G.number_of_edges(), 2)
def test_add_edges_from(self):
G = self.Graph()
G.add_edges_from([(0, 1), (0, 1, {'weight': 3})])
assert_equal(G.adj, {0: {1: {0: {}, 1: {'weight': 3}}},
1: {0: {0: {}, 1: {'weight': 3}}}})
G.add_edges_from([(0, 1), (0, 1, {'weight': 3})], weight=2)
assert_equal(G.adj, {0: {1: {0: {}, 1: {'weight': 3},
2: {'weight': 2}, 3: {'weight': 3}}},
1: {0: {0: {}, 1: {'weight': 3},
2: {'weight': 2}, 3: {'weight': 3}}}})
G = self.Graph()
edges = [(0, 1, {'weight': 3}), (0, 1, (('weight', 2),)),
(0, 1, 5), (0, 1, 's')]
G.add_edges_from(edges)
keydict = {0: {'weight': 3}, 1: {'weight': 2}, 5: {}, 's': {}}
assert_equal(G._adj, {0: {1: keydict}, 1: {0: keydict}})
# too few in tuple
assert_raises(nx.NetworkXError, G.add_edges_from, [(0,)])
# too many in tuple
assert_raises(nx.NetworkXError, G.add_edges_from, [(0, 1, 2, 3, 4)])
# not a tuple
assert_raises(TypeError, G.add_edges_from, [0])
def test_remove_edge(self):
G = self.K3
G.remove_edge(0, 1)
assert_equal(G.adj, {0: {2: {0: {}}},
1: {2: {0: {}}},
2: {0: {0: {}},
1: {0: {}}}})
assert_raises((KeyError, nx.NetworkXError), G.remove_edge, -1, 0)
assert_raises((KeyError, nx.NetworkXError), G.remove_edge, 0, 2,
key=1)
def test_remove_edges_from(self):
G = self.K3.copy()
G.remove_edges_from([(0, 1)])
kd = {0: {}}
assert_equal(G.adj, {0: {2: kd}, 1: {2: kd}, 2: {0: kd, 1: kd}})
G.remove_edges_from([(0, 0)]) # silent fail
self.K3.add_edge(0, 1)
G = self.K3.copy()
G.remove_edges_from(list(G.edges(data=True, keys=True)))
assert_equal(G.adj, {0: {}, 1: {}, 2: {}})
G = self.K3.copy()
G.remove_edges_from(list(G.edges(data=False, keys=True)))
assert_equal(G.adj, {0: {}, 1: {}, 2: {}})
G = self.K3.copy()
G.remove_edges_from(list(G.edges(data=False, keys=False)))
assert_equal(G.adj, {0: {}, 1: {}, 2: {}})
G = self.K3.copy()
G.remove_edges_from([(0, 1, 0), (0, 2, 0, {}), (1, 2)])
assert_equal(G.adj, {0: {1: {1: {}}}, 1: {0: {1: {}}}, 2: {}})
def test_remove_multiedge(self):
G = self.K3
G.add_edge(0, 1, key='parallel edge')
G.remove_edge(0, 1, key='parallel edge')
assert_equal(G.adj, {0: {1: {0: {}}, 2: {0: {}}},
1: {0: {0: {}}, 2: {0: {}}},
2: {0: {0: {}}, 1: {0: {}}}})
G.remove_edge(0, 1)
kd = {0: {}}
assert_equal(G.adj, {0: {2: kd}, 1: {2: kd}, 2: {0: kd, 1: kd}})
assert_raises((KeyError, nx.NetworkXError), G.remove_edge, -1, 0)
class TestEdgeSubgraph(object):
"""Unit tests for the :meth:`MultiGraph.edge_subgraph` method."""
def setup(self):
# Create a doubly-linked path graph on five nodes.
G = nx.MultiGraph()
nx.add_path(G, range(5))
nx.add_path(G, range(5))
# Add some node, edge, and graph attributes.
for i in range(5):
G.nodes[i]['name'] = 'node{}'.format(i)
G.adj[0][1][0]['name'] = 'edge010'
G.adj[0][1][1]['name'] = 'edge011'
G.adj[3][4][0]['name'] = 'edge340'
G.adj[3][4][1]['name'] = 'edge341'
G.graph['name'] = 'graph'
# Get the subgraph induced by one of the first edges and one of
# the last edges.
self.G = G
self.H = G.edge_subgraph([(0, 1, 0), (3, 4, 1)])
def test_correct_nodes(self):
"""Tests that the subgraph has the correct nodes."""
assert_equal([0, 1, 3, 4], sorted(self.H.nodes()))
def test_correct_edges(self):
"""Tests that the subgraph has the correct edges."""
assert_equal([(0, 1, 0, 'edge010'), (3, 4, 1, 'edge341')],
sorted(self.H.edges(keys=True, data='name')))
def test_add_node(self):
"""Tests that adding a node to the original graph does not
affect the nodes of the subgraph.
"""
self.G.add_node(5)
assert_equal([0, 1, 3, 4], sorted(self.H.nodes()))
def test_remove_node(self):
"""Tests that removing a node in the original graph does
affect the nodes of the subgraph.
"""
self.G.remove_node(0)
assert_equal([1, 3, 4], sorted(self.H.nodes()))
def test_node_attr_dict(self):
"""Tests that the node attribute dictionary of the two graphs is
the same object.
"""
for v in self.H:
assert_equal(self.G.nodes[v], self.H.nodes[v])
# Making a change to G should make a change in H and vice versa.
self.G.nodes[0]['name'] = 'foo'
assert_equal(self.G.nodes[0], self.H.nodes[0])
self.H.nodes[1]['name'] = 'bar'
assert_equal(self.G.nodes[1], self.H.nodes[1])
def test_edge_attr_dict(self):
"""Tests that the edge attribute dictionary of the two graphs is
the same object.
"""
for u, v, k in self.H.edges(keys=True):
assert_equal(self.G._adj[u][v][k], self.H._adj[u][v][k])
# Making a change to G should make a change in H and vice versa.
self.G._adj[0][1][0]['name'] = 'foo'
assert_equal(self.G._adj[0][1][0]['name'],
self.H._adj[0][1][0]['name'])
self.H._adj[3][4][1]['name'] = 'bar'
assert_equal(self.G._adj[3][4][1]['name'],
self.H._adj[3][4][1]['name'])
def test_graph_attr_dict(self):
"""Tests that the graph attribute dictionary of the two graphs
is the same object.
"""
assert_is(self.G.graph, self.H.graph)