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1.3.5 ▾
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"""Check that functions can handle list input"""
import warnings
import numpy as np
from numpy.testing import assert_array_almost_equal
import bottleneck as bn
from .util import DTYPES
import pytest
def lists(dtypes=DTYPES):
"""Iterator that yields lists to use for unit testing."""
ss = {}
ss[1] = {"size": 4, "shapes": [(4,)]}
ss[2] = {"size": 6, "shapes": [(1, 6), (2, 3)]}
ss[3] = {"size": 6, "shapes": [(1, 2, 3)]}
ss[4] = {"size": 24, "shapes": [(1, 2, 3, 4)]}
for ndim in ss:
size = ss[ndim]["size"]
shapes = ss[ndim]["shapes"]
a = np.arange(size)
for shape in shapes:
a = a.reshape(shape)
for dtype in dtypes:
yield a.astype(dtype).tolist()
@pytest.mark.parametrize("func", bn.get_functions("all"), ids=lambda x: x.__name__)
def test_list_input(func):
"""Test that bn.xxx gives the same output as bn.slow.xxx for list input."""
msg = "\nfunc %s | input %s (%s) | shape %s\n"
msg += "\nInput array:\n%s\n"
name = func.__name__
if name == "replace":
return
func0 = eval("bn.slow.%s" % name)
for i, a in enumerate(lists()):
with warnings.catch_warnings():
warnings.simplefilter("ignore")
try:
actual = func(a)
desired = func0(a)
except TypeError:
actual = func(a, 2)
desired = func0(a, 2)
a = np.array(a)
tup = (name, "a" + str(i), str(a.dtype), str(a.shape), a)
err_msg = msg % tup
assert_array_almost_equal(actual, desired, err_msg=err_msg)