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duality-group / networkx python
Repository URL to install this package:
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Version:
3.2.1 ▾
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"""Unit testing for time dependent algorithms."""
from datetime import datetime, timedelta
import pytest
import networkx as nx
_delta = timedelta(days=5 * 365)
class TestCdIndex:
"""Unit testing for the cd index function."""
def test_common_graph(self):
G = nx.DiGraph()
G.add_nodes_from([0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10])
G.add_edge(4, 2)
G.add_edge(4, 0)
G.add_edge(4, 1)
G.add_edge(4, 3)
G.add_edge(5, 2)
G.add_edge(6, 2)
G.add_edge(6, 4)
G.add_edge(7, 4)
G.add_edge(8, 4)
G.add_edge(9, 4)
G.add_edge(9, 1)
G.add_edge(9, 3)
G.add_edge(10, 4)
node_attrs = {
0: {"time": datetime(1992, 1, 1)},
1: {"time": datetime(1992, 1, 1)},
2: {"time": datetime(1993, 1, 1)},
3: {"time": datetime(1993, 1, 1)},
4: {"time": datetime(1995, 1, 1)},
5: {"time": datetime(1997, 1, 1)},
6: {"time": datetime(1998, 1, 1)},
7: {"time": datetime(1999, 1, 1)},
8: {"time": datetime(1999, 1, 1)},
9: {"time": datetime(1998, 1, 1)},
10: {"time": datetime(1997, 4, 1)},
}
nx.set_node_attributes(G, node_attrs)
assert nx.cd_index(G, 4, time_delta=_delta) == 0.17
def test_common_graph_with_given_attributes(self):
G = nx.DiGraph()
G.add_nodes_from([0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10])
G.add_edge(4, 2)
G.add_edge(4, 0)
G.add_edge(4, 1)
G.add_edge(4, 3)
G.add_edge(5, 2)
G.add_edge(6, 2)
G.add_edge(6, 4)
G.add_edge(7, 4)
G.add_edge(8, 4)
G.add_edge(9, 4)
G.add_edge(9, 1)
G.add_edge(9, 3)
G.add_edge(10, 4)
node_attrs = {
0: {"date": datetime(1992, 1, 1)},
1: {"date": datetime(1992, 1, 1)},
2: {"date": datetime(1993, 1, 1)},
3: {"date": datetime(1993, 1, 1)},
4: {"date": datetime(1995, 1, 1)},
5: {"date": datetime(1997, 1, 1)},
6: {"date": datetime(1998, 1, 1)},
7: {"date": datetime(1999, 1, 1)},
8: {"date": datetime(1999, 1, 1)},
9: {"date": datetime(1998, 1, 1)},
10: {"date": datetime(1997, 4, 1)},
}
nx.set_node_attributes(G, node_attrs)
assert nx.cd_index(G, 4, time_delta=_delta, time="date") == 0.17
def test_common_graph_with_int_attributes(self):
G = nx.DiGraph()
G.add_nodes_from([0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10])
G.add_edge(4, 2)
G.add_edge(4, 0)
G.add_edge(4, 1)
G.add_edge(4, 3)
G.add_edge(5, 2)
G.add_edge(6, 2)
G.add_edge(6, 4)
G.add_edge(7, 4)
G.add_edge(8, 4)
G.add_edge(9, 4)
G.add_edge(9, 1)
G.add_edge(9, 3)
G.add_edge(10, 4)
node_attrs = {
0: {"time": 20},
1: {"time": 20},
2: {"time": 30},
3: {"time": 30},
4: {"time": 50},
5: {"time": 70},
6: {"time": 80},
7: {"time": 90},
8: {"time": 90},
9: {"time": 80},
10: {"time": 74},
}
nx.set_node_attributes(G, node_attrs)
assert nx.cd_index(G, 4, time_delta=50) == 0.17
def test_common_graph_with_float_attributes(self):
G = nx.DiGraph()
G.add_nodes_from([0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10])
G.add_edge(4, 2)
G.add_edge(4, 0)
G.add_edge(4, 1)
G.add_edge(4, 3)
G.add_edge(5, 2)
G.add_edge(6, 2)
G.add_edge(6, 4)
G.add_edge(7, 4)
G.add_edge(8, 4)
G.add_edge(9, 4)
G.add_edge(9, 1)
G.add_edge(9, 3)
G.add_edge(10, 4)
node_attrs = {
0: {"time": 20.2},
1: {"time": 20.2},
2: {"time": 30.7},
3: {"time": 30.7},
4: {"time": 50.9},
5: {"time": 70.1},
6: {"time": 80.6},
7: {"time": 90.7},
8: {"time": 90.7},
9: {"time": 80.6},
10: {"time": 74.2},
}
nx.set_node_attributes(G, node_attrs)
assert nx.cd_index(G, 4, time_delta=50) == 0.17
def test_common_graph_with_weights(self):
G = nx.DiGraph()
G.add_nodes_from([0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10])
G.add_edge(4, 2)
G.add_edge(4, 0)
G.add_edge(4, 1)
G.add_edge(4, 3)
G.add_edge(5, 2)
G.add_edge(6, 2)
G.add_edge(6, 4)
G.add_edge(7, 4)
G.add_edge(8, 4)
G.add_edge(9, 4)
G.add_edge(9, 1)
G.add_edge(9, 3)
G.add_edge(10, 4)
node_attrs = {
0: {"time": datetime(1992, 1, 1)},
1: {"time": datetime(1992, 1, 1)},
2: {"time": datetime(1993, 1, 1)},
3: {"time": datetime(1993, 1, 1)},
4: {"time": datetime(1995, 1, 1)},
5: {"time": datetime(1997, 1, 1)},
6: {"time": datetime(1998, 1, 1), "weight": 5},
7: {"time": datetime(1999, 1, 1), "weight": 2},
8: {"time": datetime(1999, 1, 1), "weight": 6},
9: {"time": datetime(1998, 1, 1), "weight": 3},
10: {"time": datetime(1997, 4, 1), "weight": 10},
}
nx.set_node_attributes(G, node_attrs)
assert nx.cd_index(G, 4, time_delta=_delta, weight="weight") == 0.04
def test_node_with_no_predecessors(self):
G = nx.DiGraph()
G.add_nodes_from([0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10])
G.add_edge(4, 2)
G.add_edge(4, 0)
G.add_edge(4, 3)
G.add_edge(5, 2)
G.add_edge(6, 2)
G.add_edge(6, 4)
G.add_edge(7, 4)
G.add_edge(8, 4)
G.add_edge(9, 4)
G.add_edge(9, 1)
G.add_edge(9, 3)
G.add_edge(10, 4)
node_attrs = {
0: {"time": datetime(1992, 1, 1)},
1: {"time": datetime(1992, 1, 1)},
2: {"time": datetime(1993, 1, 1)},
3: {"time": datetime(1993, 1, 1)},
4: {"time": datetime(1995, 1, 1)},
5: {"time": datetime(2005, 1, 1)},
6: {"time": datetime(2010, 1, 1)},
7: {"time": datetime(2001, 1, 1)},
8: {"time": datetime(2020, 1, 1)},
9: {"time": datetime(2017, 1, 1)},
10: {"time": datetime(2004, 4, 1)},
}
nx.set_node_attributes(G, node_attrs)
assert nx.cd_index(G, 4, time_delta=_delta) == 0.0
def test_node_with_no_successors(self):
G = nx.DiGraph()
G.add_nodes_from([0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10])
G.add_edge(8, 2)
G.add_edge(6, 0)
G.add_edge(6, 3)
G.add_edge(5, 2)
G.add_edge(6, 2)
G.add_edge(6, 4)
G.add_edge(7, 4)
G.add_edge(8, 4)
G.add_edge(9, 4)
G.add_edge(9, 1)
G.add_edge(9, 3)
G.add_edge(10, 4)
node_attrs = {
0: {"time": datetime(1992, 1, 1)},
1: {"time": datetime(1992, 1, 1)},
2: {"time": datetime(1993, 1, 1)},
3: {"time": datetime(1993, 1, 1)},
4: {"time": datetime(1995, 1, 1)},
5: {"time": datetime(1997, 1, 1)},
6: {"time": datetime(1998, 1, 1)},
7: {"time": datetime(1999, 1, 1)},
8: {"time": datetime(1999, 1, 1)},
9: {"time": datetime(1998, 1, 1)},
10: {"time": datetime(1997, 4, 1)},
}
nx.set_node_attributes(G, node_attrs)
assert nx.cd_index(G, 4, time_delta=_delta) == 1.0
def test_n_equals_zero(self):
G = nx.DiGraph()
G.add_nodes_from([0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10])
G.add_edge(4, 2)
G.add_edge(4, 0)
G.add_edge(4, 3)
G.add_edge(6, 4)
G.add_edge(7, 4)
G.add_edge(8, 4)
G.add_edge(9, 4)
G.add_edge(9, 1)
G.add_edge(10, 4)
node_attrs = {
0: {"time": datetime(1992, 1, 1)},
1: {"time": datetime(1992, 1, 1)},
2: {"time": datetime(1993, 1, 1)},
3: {"time": datetime(1993, 1, 1)},
4: {"time": datetime(1995, 1, 1)},
5: {"time": datetime(2005, 1, 1)},
6: {"time": datetime(2010, 1, 1)},
7: {"time": datetime(2001, 1, 1)},
8: {"time": datetime(2020, 1, 1)},
9: {"time": datetime(2017, 1, 1)},
10: {"time": datetime(2004, 4, 1)},
}
nx.set_node_attributes(G, node_attrs)
with pytest.raises(
nx.NetworkXError, match="The cd index cannot be defined."
) as ve:
nx.cd_index(G, 4, time_delta=_delta)
def test_time_timedelta_compatibility(self):
G = nx.DiGraph()
G.add_nodes_from([0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10])
G.add_edge(4, 2)
G.add_edge(4, 0)
G.add_edge(4, 3)
G.add_edge(6, 4)
G.add_edge(7, 4)
G.add_edge(8, 4)
G.add_edge(9, 4)
G.add_edge(9, 1)
G.add_edge(10, 4)
node_attrs = {
0: {"time": 20.2},
1: {"time": 20.2},
2: {"time": 30.7},
3: {"time": 30.7},
4: {"time": 50.9},
5: {"time": 70.1},
6: {"time": 80.6},
7: {"time": 90.7},
8: {"time": 90.7},
9: {"time": 80.6},
10: {"time": 74.2},
}
nx.set_node_attributes(G, node_attrs)
with pytest.raises(
nx.NetworkXError,
match="Addition and comparison are not supported between",
) as ve:
nx.cd_index(G, 4, time_delta=_delta)
def test_node_with_no_time(self):
G = nx.DiGraph()
G.add_nodes_from([0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10])
G.add_edge(8, 2)
G.add_edge(6, 0)
G.add_edge(6, 3)
G.add_edge(5, 2)
G.add_edge(6, 2)
G.add_edge(6, 4)
G.add_edge(7, 4)
G.add_edge(8, 4)
G.add_edge(9, 4)
G.add_edge(9, 1)
G.add_edge(9, 3)
G.add_edge(10, 4)
node_attrs = {
0: {"time": datetime(1992, 1, 1)},
1: {"time": datetime(1992, 1, 1)},
2: {"time": datetime(1993, 1, 1)},
3: {"time": datetime(1993, 1, 1)},
4: {"time": datetime(1995, 1, 1)},
6: {"time": datetime(1998, 1, 1)},
7: {"time": datetime(1999, 1, 1)},
8: {"time": datetime(1999, 1, 1)},
9: {"time": datetime(1998, 1, 1)},
10: {"time": datetime(1997, 4, 1)},
}
nx.set_node_attributes(G, node_attrs)
with pytest.raises(
nx.NetworkXError, match="Not all nodes have a 'time' attribute."
) as ve:
nx.cd_index(G, 4, time_delta=_delta)
def test_maximally_consolidating(self):
G = nx.DiGraph()
G.add_nodes_from([0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11])
G.add_edge(5, 1)
G.add_edge(5, 2)
G.add_edge(5, 3)
G.add_edge(5, 4)
G.add_edge(6, 1)
G.add_edge(6, 5)
G.add_edge(7, 1)
G.add_edge(7, 5)
G.add_edge(8, 2)
G.add_edge(8, 5)
G.add_edge(9, 5)
G.add_edge(9, 3)
G.add_edge(10, 5)
G.add_edge(10, 3)
G.add_edge(10, 4)
G.add_edge(11, 5)
G.add_edge(11, 4)
node_attrs = {
0: {"time": datetime(1992, 1, 1)},
1: {"time": datetime(1992, 1, 1)},
2: {"time": datetime(1993, 1, 1)},
3: {"time": datetime(1993, 1, 1)},
4: {"time": datetime(1995, 1, 1)},
5: {"time": datetime(1997, 1, 1)},
6: {"time": datetime(1998, 1, 1)},
7: {"time": datetime(1999, 1, 1)},
8: {"time": datetime(1999, 1, 1)},
9: {"time": datetime(1998, 1, 1)},
10: {"time": datetime(1997, 4, 1)},
11: {"time": datetime(1998, 5, 1)},
}
nx.set_node_attributes(G, node_attrs)
assert nx.cd_index(G, 5, time_delta=_delta) == -1
def test_maximally_destabilizing(self):
G = nx.DiGraph()
G.add_nodes_from([0, 1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11])
G.add_edge(5, 1)
G.add_edge(5, 2)
G.add_edge(5, 3)
G.add_edge(5, 4)
G.add_edge(6, 5)
G.add_edge(7, 5)
G.add_edge(8, 5)
G.add_edge(9, 5)
G.add_edge(10, 5)
G.add_edge(11, 5)
node_attrs = {
0: {"time": datetime(1992, 1, 1)},
1: {"time": datetime(1992, 1, 1)},
2: {"time": datetime(1993, 1, 1)},
3: {"time": datetime(1993, 1, 1)},
4: {"time": datetime(1995, 1, 1)},
5: {"time": datetime(1997, 1, 1)},
6: {"time": datetime(1998, 1, 1)},
7: {"time": datetime(1999, 1, 1)},
8: {"time": datetime(1999, 1, 1)},
9: {"time": datetime(1998, 1, 1)},
10: {"time": datetime(1997, 4, 1)},
11: {"time": datetime(1998, 5, 1)},
}
nx.set_node_attributes(G, node_attrs)
assert nx.cd_index(G, 5, time_delta=_delta) == 1