Repository URL to install this package:
|
Version:
4.0.0 ▾
|
#!/usr/bin/env python
# -*- coding: utf-8 -*-
#
# Generated from FHIR 4.0.0-a53ec6ee1b on 2019-05-07.
# 2019, SMART Health IT.
import os
import io
import unittest
import json
from . import codesystem
from .fhirdate import FHIRDate
class CodeSystemTests(unittest.TestCase):
def instantiate_from(self, filename):
datadir = os.environ.get('FHIR_UNITTEST_DATADIR') or ''
with io.open(os.path.join(datadir, filename), 'r', encoding='utf-8') as handle:
js = json.load(handle)
self.assertEqual("CodeSystem", js["resourceType"])
return codesystem.CodeSystem(js)
def testCodeSystem1(self):
inst = self.instantiate_from("codesystem-example-supplement.json")
self.assertIsNotNone(inst, "Must have instantiated a CodeSystem instance")
self.implCodeSystem1(inst)
js = inst.as_json()
self.assertEqual("CodeSystem", js["resourceType"])
inst2 = codesystem.CodeSystem(js)
self.implCodeSystem1(inst2)
def implCodeSystem1(self, inst):
self.assertEqual(inst.concept[0].code, "chol-mmol")
self.assertEqual(inst.concept[0].property[0].code, "legacy")
self.assertFalse(inst.concept[0].property[0].valueBoolean)
self.assertEqual(inst.concept[1].code, "chol-mass")
self.assertEqual(inst.concept[1].property[0].code, "legacy")
self.assertTrue(inst.concept[1].property[0].valueBoolean)
self.assertEqual(inst.concept[2].code, "chol")
self.assertEqual(inst.concept[2].property[0].code, "legacy")
self.assertTrue(inst.concept[2].property[0].valueBoolean)
self.assertEqual(inst.contact[0].name, "FHIR project team")
self.assertEqual(inst.contact[0].telecom[0].system, "url")
self.assertEqual(inst.contact[0].telecom[0].value, "http://hl7.org/fhir")
self.assertEqual(inst.content, "supplement")
self.assertEqual(inst.date.date, FHIRDate("2016-01-28").date)
self.assertEqual(inst.date.as_json(), "2016-01-28")
self.assertTrue(inst.experimental)
self.assertEqual(inst.id, "example-supplement")
self.assertEqual(inst.name, "CholCodeLegacyStatus")
self.assertEqual(inst.property[0].code, "legacy")
self.assertEqual(inst.property[0].description, "hether the test is currently performed")
self.assertEqual(inst.property[0].type, "boolean")
self.assertEqual(inst.publisher, "ACME Co")
self.assertEqual(inst.status, "draft")
self.assertEqual(inst.supplements, "http://hl7.org/fhir/CodeSystem/example")
self.assertEqual(inst.text.status, "generated")
self.assertEqual(inst.url, "http://hl7.org/fhir/CodeSystem/example-supplement")
self.assertEqual(inst.version, "201801103")
def testCodeSystem2(self):
inst = self.instantiate_from("codesystem-list-example-codes.json")
self.assertIsNotNone(inst, "Must have instantiated a CodeSystem instance")
self.implCodeSystem2(inst)
js = inst.as_json()
self.assertEqual("CodeSystem", js["resourceType"])
inst2 = codesystem.CodeSystem(js)
self.implCodeSystem2(inst2)
def implCodeSystem2(self, inst):
self.assertTrue(inst.caseSensitive)
self.assertEqual(inst.concept[0].code, "alerts")
self.assertEqual(inst.concept[0].definition, "A list of alerts for the patient.")
self.assertEqual(inst.concept[0].display, "Alerts")
self.assertEqual(inst.concept[1].code, "adverserxns")
self.assertEqual(inst.concept[1].definition, "A list of part adverse reactions.")
self.assertEqual(inst.concept[1].display, "Adverse Reactions")
self.assertEqual(inst.concept[2].code, "allergies")
self.assertEqual(inst.concept[2].definition, "A list of Allergies for the patient.")
self.assertEqual(inst.concept[2].display, "Allergies")
self.assertEqual(inst.concept[3].code, "medications")
self.assertEqual(inst.concept[3].definition, "A list of medication statements for the patient.")
self.assertEqual(inst.concept[3].display, "Medication List")
self.assertEqual(inst.concept[4].code, "problems")
self.assertEqual(inst.concept[4].definition, "A list of problems that the patient is known of have (or have had in the past).")
self.assertEqual(inst.concept[4].display, "Problem List")
self.assertEqual(inst.concept[5].code, "worklist")
self.assertEqual(inst.concept[5].definition, "A list of items that constitute a set of work to be performed (typically this code would be specialized for more specific uses, such as a ward round list).")
self.assertEqual(inst.concept[5].display, "Worklist")
self.assertEqual(inst.concept[6].code, "waiting")
self.assertEqual(inst.concept[6].definition, "A list of items waiting for an event (perhaps a surgical patient waiting list).")
self.assertEqual(inst.concept[6].display, "Waiting List")
self.assertEqual(inst.concept[7].code, "protocols")
self.assertEqual(inst.concept[7].definition, "A set of protocols to be followed.")
self.assertEqual(inst.concept[7].display, "Protocols")
self.assertEqual(inst.concept[8].code, "plans")
self.assertEqual(inst.concept[8].definition, "A set of care plans that apply in a particular context of care.")
self.assertEqual(inst.concept[8].display, "Care Plans")
self.assertEqual(inst.contact[0].telecom[0].system, "url")
self.assertEqual(inst.contact[0].telecom[0].value, "http://hl7.org/fhir")
self.assertEqual(inst.content, "complete")
self.assertEqual(inst.description, "Example use codes for the List resource - typical kinds of use.")
self.assertFalse(inst.experimental)
self.assertEqual(inst.extension[0].url, "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg")
self.assertEqual(inst.extension[0].valueCode, "fhir")
self.assertEqual(inst.extension[1].url, "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status")
self.assertEqual(inst.extension[1].valueCode, "draft")
self.assertEqual(inst.extension[2].url, "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm")
self.assertEqual(inst.extension[2].valueInteger, 1)
self.assertEqual(inst.id, "list-example-codes")
self.assertEqual(inst.identifier[0].system, "urn:ietf:rfc:3986")
self.assertEqual(inst.identifier[0].value, "urn:oid:2.16.840.1.113883.4.642.1.1105")
self.assertEqual(inst.meta.lastUpdated.date, FHIRDate("2018-12-27T22:37:54.724+11:00").date)
self.assertEqual(inst.meta.lastUpdated.as_json(), "2018-12-27T22:37:54.724+11:00")
self.assertEqual(inst.meta.profile[0], "http://hl7.org/fhir/StructureDefinition/shareablecodesystem")
self.assertEqual(inst.name, "ExampleUseCodesForList")
self.assertEqual(inst.publisher, "FHIR Project")
self.assertEqual(inst.status, "draft")
self.assertEqual(inst.text.status, "generated")
self.assertEqual(inst.title, "Example Use Codes for List")
self.assertEqual(inst.url, "http://terminology.hl7.org/CodeSystem/list-example-use-codes")
self.assertEqual(inst.valueSet, "http://hl7.org/fhir/ValueSet/list-example-codes")
self.assertEqual(inst.version, "4.0.0")
def testCodeSystem3(self):
inst = self.instantiate_from("codesystem-examplescenario-actor-type.json")
self.assertIsNotNone(inst, "Must have instantiated a CodeSystem instance")
self.implCodeSystem3(inst)
js = inst.as_json()
self.assertEqual("CodeSystem", js["resourceType"])
inst2 = codesystem.CodeSystem(js)
self.implCodeSystem3(inst2)
def implCodeSystem3(self, inst):
self.assertTrue(inst.caseSensitive)
self.assertEqual(inst.concept[0].code, "person")
self.assertEqual(inst.concept[0].definition, "A person.")
self.assertEqual(inst.concept[0].display, "Person")
self.assertEqual(inst.concept[1].code, "entity")
self.assertEqual(inst.concept[1].definition, "A system.")
self.assertEqual(inst.concept[1].display, "System")
self.assertEqual(inst.contact[0].telecom[0].system, "url")
self.assertEqual(inst.contact[0].telecom[0].value, "http://hl7.org/fhir")
self.assertEqual(inst.contact[0].telecom[1].system, "email")
self.assertEqual(inst.contact[0].telecom[1].value, "fhir@lists.hl7.org")
self.assertEqual(inst.content, "complete")
self.assertEqual(inst.date.date, FHIRDate("2018-12-27T22:37:54+11:00").date)
self.assertEqual(inst.date.as_json(), "2018-12-27T22:37:54+11:00")
self.assertEqual(inst.description, "The type of actor - system or human.")
self.assertFalse(inst.experimental)
self.assertEqual(inst.extension[0].url, "http://hl7.org/fhir/StructureDefinition/structuredefinition-wg")
self.assertEqual(inst.extension[0].valueCode, "fhir")
self.assertEqual(inst.extension[1].url, "http://hl7.org/fhir/StructureDefinition/structuredefinition-standards-status")
self.assertEqual(inst.extension[1].valueCode, "trial-use")
self.assertEqual(inst.extension[2].url, "http://hl7.org/fhir/StructureDefinition/structuredefinition-fmm")
self.assertEqual(inst.extension[2].valueInteger, 0)
self.assertEqual(inst.id, "examplescenario-actor-type")
self.assertEqual(inst.identifier[0].system, "urn:ietf:rfc:3986")
self.assertEqual(inst.identifier[0].value, "urn:oid:2.16.840.1.113883.4.642.1.859")
self.assertEqual(inst.meta.lastUpdated.date, FHIRDate("2018-12-27T22:37:54.724+11:00").date)
self.assertEqual(inst.meta.lastUpdated.as_json(), "2018-12-27T22:37:54.724+11:00")
self.assertEqual(inst.name, "ExampleScenarioActorType")
self.assertEqual(inst.publisher, "HL7 (FHIR Project)")
self.assertEqual(inst.status, "draft")
self.assertEqual(inst.text.status, "generated")
self.assertEqual(inst.title, "ExampleScenarioActorType")
self.assertEqual(inst.url, "http://hl7.org/fhir/examplescenario-actor-type")
self.assertEqual(inst.valueSet, "http://hl7.org/fhir/ValueSet/examplescenario-actor-type")
self.assertEqual(inst.version, "4.0.0")
def testCodeSystem4(self):
inst = self.instantiate_from("codesystem-example-summary.json")
self.assertIsNotNone(inst, "Must have instantiated a CodeSystem instance")
self.implCodeSystem4(inst)
js = inst.as_json()
self.assertEqual("CodeSystem", js["resourceType"])
inst2 = codesystem.CodeSystem(js)
self.implCodeSystem4(inst2)
def implCodeSystem4(self, inst):
self.assertTrue(inst.caseSensitive)
self.assertEqual(inst.contact[0].name, "FHIR project team")
self.assertEqual(inst.contact[0].telecom[0].system, "url")
self.assertEqual(inst.contact[0].telecom[0].value, "http://hl7.org/fhir")
self.assertEqual(inst.content, "not-present")
self.assertEqual(inst.count, 92)
self.assertEqual(inst.description, "This is an example code system summary for the ACME codes for body site.")
self.assertTrue(inst.experimental)
self.assertEqual(inst.id, "summary")
self.assertEqual(inst.jurisdiction[0].coding[0].code, "CA")
self.assertEqual(inst.jurisdiction[0].coding[0].system, "urn:iso:std:iso:3166")
self.assertEqual(inst.name, "Code system summary example for ACME body sites")
self.assertEqual(inst.publisher, "HL7 International")
self.assertEqual(inst.status, "draft")
self.assertEqual(inst.text.status, "generated")
self.assertEqual(inst.url, "http://hl7.org/fhir/CodeSystem/summary")
self.assertEqual(inst.useContext[0].code.code, "species")
self.assertEqual(inst.useContext[0].code.system, "http://example.org/CodeSystem/contexttype")
self.assertEqual(inst.useContext[0].valueCodeableConcept.coding[0].code, "337915000")
self.assertEqual(inst.useContext[0].valueCodeableConcept.coding[0].display, "Homo sapiens (organism)")
self.assertEqual(inst.useContext[0].valueCodeableConcept.coding[0].system, "http://snomed.info/sct")
self.assertEqual(inst.version, "4.0.0")
def testCodeSystem5(self):
inst = self.instantiate_from("codesystem-example.json")
self.assertIsNotNone(inst, "Must have instantiated a CodeSystem instance")
self.implCodeSystem5(inst)
js = inst.as_json()
self.assertEqual("CodeSystem", js["resourceType"])
inst2 = codesystem.CodeSystem(js)
self.implCodeSystem5(inst2)
def implCodeSystem5(self, inst):
self.assertTrue(inst.caseSensitive)
self.assertEqual(inst.concept[0].code, "chol-mmol")
self.assertEqual(inst.concept[0].definition, "Serum Cholesterol, in mmol/L")
self.assertEqual(inst.concept[0].designation[0].use.code, "internal-label")
self.assertEqual(inst.concept[0].designation[0].use.system, "http://acme.com/config/fhir/codesystems/internal")
self.assertEqual(inst.concept[0].designation[0].value, "From ACME POC Testing")
self.assertEqual(inst.concept[0].display, "SChol (mmol/L)")
self.assertEqual(inst.concept[1].code, "chol-mass")
self.assertEqual(inst.concept[1].definition, "Serum Cholesterol, in mg/L")
self.assertEqual(inst.concept[1].designation[0].use.code, "internal-label")
self.assertEqual(inst.concept[1].designation[0].use.system, "http://acme.com/config/fhir/codesystems/internal")
self.assertEqual(inst.concept[1].designation[0].value, "From Paragon Labs")
self.assertEqual(inst.concept[1].display, "SChol (mg/L)")
self.assertEqual(inst.concept[2].code, "chol")
self.assertEqual(inst.concept[2].definition, "Serum Cholesterol")
self.assertEqual(inst.concept[2].designation[0].use.code, "internal-label")
self.assertEqual(inst.concept[2].designation[0].use.system, "http://acme.com/config/fhir/codesystems/internal")
self.assertEqual(inst.concept[2].designation[0].value, "Obdurate Labs uses this with both kinds of units...")
self.assertEqual(inst.concept[2].display, "SChol")
self.assertEqual(inst.contact[0].name, "FHIR project team")
self.assertEqual(inst.contact[0].telecom[0].system, "url")
self.assertEqual(inst.contact[0].telecom[0].value, "http://hl7.org/fhir")
self.assertEqual(inst.content, "complete")
self.assertEqual(inst.date.date, FHIRDate("2016-01-28").date)
self.assertEqual(inst.date.as_json(), "2016-01-28")
self.assertEqual(inst.description, "This is an example code system that includes all the ACME codes for serum/plasma cholesterol from v2.36.")
self.assertTrue(inst.experimental)
self.assertEqual(inst.filter[0].code, "acme-plasma")
self.assertEqual(inst.filter[0].description, "An internal filter used to select codes that are only used with plasma")
self.assertEqual(inst.filter[0].operator[0], "=")
self.assertEqual(inst.filter[0].value, "the value of this filter is either 'true' or 'false'")
self.assertEqual(inst.id, "example")
self.assertEqual(inst.identifier[0].system, "http://acme.com/identifiers/codesystems")
self.assertEqual(inst.identifier[0].value, "internal-cholesterol-inl")
self.assertEqual(inst.meta.profile[0], "http://hl7.org/fhir/StructureDefinition/shareablecodesystem")
self.assertEqual(inst.name, "ACMECholCodesBlood")
self.assertEqual(inst.publisher, "Acme Co")
self.assertEqual(inst.status, "draft")
self.assertEqual(inst.text.status, "generated")
self.assertEqual(inst.title, "ACME Codes for Cholesterol in Serum/Plasma")
self.assertEqual(inst.url, "http://hl7.org/fhir/CodeSystem/example")
self.assertEqual(inst.version, "20160128")