# Dual Annealing implementation.
# Copyright (c) 2018 Sylvain Gubian <sylvain.gubian@pmi.com>,
# Yang Xiang <yang.xiang@pmi.com>
# Author: Sylvain Gubian, Yang Xiang, PMP S.A.
"""
A Dual Annealing global optimization algorithm
"""
from __future__ import division, print_function, absolute_import
import numpy as np
from scipy.optimize import OptimizeResult
from scipy.optimize import minimize
from scipy.special import gammaln
from scipy._lib._util import check_random_state
__all__ = ['dual_annealing']
class VisitingDistribution(object):
"""
Class used to generate new coordinates based on the distorted
Cauchy-Lorentz distribution. Depending on the steps within the strategy
chain, the class implements the strategy for generating new location
changes.
Parameters
----------
lb : array_like
A 1-D numpy ndarray containing lower bounds of the generated
components. Neither NaN or inf are allowed.
ub : array_like
A 1-D numpy ndarray containing upper bounds for the generated
components. Neither NaN or inf are allowed.
visiting_param : float
Parameter for visiting distribution. Default value is 2.62.
Higher values give the visiting distribution a heavier tail, this
makes the algorithm jump to a more distant region.
The value range is (0, 3]. It's value is fixed for the life of the
object.
rand_state : `~numpy.random.mtrand.RandomState` object
A `~numpy.random.mtrand.RandomState` object for using the current state
of the created random generator container.
"""
TAIL_LIMIT = 1.e8
MIN_VISIT_BOUND = 1.e-10
def __init__(self, lb, ub, visiting_param, rand_state):
# if you wish to make _visiting_param adjustable during the life of
# the object then _factor2, _factor3, _factor5, _d1, _factor6 will
# have to be dynamically calculated in `visit_fn`. They're factored
# out here so they don't need to be recalculated all the time.
self._visiting_param = visiting_param
self.rand_state = rand_state
self.lower = lb
self.upper = ub
self.bound_range = ub - lb
# these are invariant numbers unless visiting_param changes
self._factor2 = np.exp((4.0 - self._visiting_param) * np.log(
self._visiting_param - 1.0))
self._factor3 = np.exp((2.0 - self._visiting_param) * np.log(2.0)
/ (self._visiting_param - 1.0))
self._factor4_p = np.sqrt(np.pi) * self._factor2 / (self._factor3 * (
3.0 - self._visiting_param))
self._factor5 = 1.0 / (self._visiting_param - 1.0) - 0.5
self._d1 = 2.0 - self._factor5
self._factor6 = np.pi * (1.0 - self._factor5) / np.sin(
np.pi * (1.0 - self._factor5)) / np.exp(gammaln(self._d1))
def visiting(self, x, step, temperature):
""" Based on the step in the strategy chain, new coordinated are
generated by changing all components is the same time or only
one of them, the new values are computed with visit_fn method
"""
dim = x.size
if step < dim:
# Changing all coordinates with a new visiting value
visits = self.visit_fn(temperature, dim)
upper_sample = self.rand_state.random_sample()
lower_sample = self.rand_state.random_sample()
visits[visits > self.TAIL_LIMIT] = self.TAIL_LIMIT * upper_sample
visits[visits < -self.TAIL_LIMIT] = -self.TAIL_LIMIT * lower_sample
x_visit = visits + x
a = x_visit - self.lower
b = np.fmod(a, self.bound_range) + self.bound_range
x_visit = np.fmod(b, self.bound_range) + self.lower
x_visit[np.fabs(
x_visit - self.lower) < self.MIN_VISIT_BOUND] += 1.e-10
else:
# Changing only one coordinate at a time based on strategy
# chain step
x_visit = np.copy(x)
visit = self.visit_fn(temperature, 1)
if visit > self.TAIL_LIMIT:
visit = self.TAIL_LIMIT * self.rand_state.random_sample()
elif visit < -self.TAIL_LIMIT:
visit = -self.TAIL_LIMIT * self.rand_state.random_sample()
index = step - dim
x_visit[index] = visit + x[index]
a = x_visit[index] - self.lower[index]
b = np.fmod(a, self.bound_range[index]) + self.bound_range[index]
x_visit[index] = np.fmod(b, self.bound_range[
index]) + self.lower[index]
if np.fabs(x_visit[index] - self.lower[
index]) < self.MIN_VISIT_BOUND:
x_visit[index] += self.MIN_VISIT_BOUND
return x_visit
def visit_fn(self, temperature, dim):
""" Formula Visita from p. 405 of reference [2] """
x, y = self.rand_state.normal(size=(dim, 2)).T
factor1 = np.exp(np.log(temperature) / (self._visiting_param - 1.0))
factor4 = self._factor4_p * factor1
# sigmax
x *= np.exp(-(self._visiting_param - 1.0) * np.log(
self._factor6 / factor4) / (3.0 - self._visiting_param))
den = np.exp((self._visiting_param - 1.0) * np.log(np.fabs(y)) /
(3.0 - self._visiting_param))
return x / den
class EnergyState(object):
"""
Class used to record the energy state. At any time, it knows what is the
currently used coordinates and the most recent best location.
Parameters
----------
lower : array_like
A 1-D numpy ndarray containing lower bounds for generating an initial
random components in the `reset` method.
upper : array_like
A 1-D numpy ndarray containing upper bounds for generating an initial
random components in the `reset` method
components. Neither NaN or inf are allowed.
callback : callable, ``callback(x, f, context)``, optional
A callback function which will be called for all minima found.
``x`` and ``f`` are the coordinates and function value of the
latest minimum found, and `context` has value in [0, 1, 2]
"""
# Maximimum number of trials for generating a valid starting point
MAX_REINIT_COUNT = 1000
def __init__(self, lower, upper, callback=None):
self.ebest = None
self.current_energy = None
self.current_location = None
self.xbest = None
self.lower = lower
self.upper = upper
self.callback = callback
def reset(self, func_wrapper, rand_state, x0=None):
"""
Initialize current location is the search domain. If `x0` is not
provided, a random location within the bounds is generated.
"""
if x0 is None:
self.current_location = self.lower + rand_state.random_sample(
len(self.lower)) * (self.upper - self.lower)
else:
self.current_location = np.copy(x0)
init_error = True
reinit_counter = 0
while init_error:
self.current_energy = func_wrapper.fun(self.current_location)
if self.current_energy is None:
raise ValueError('Objective function is returning None')
if (not np.isfinite(self.current_energy) or np.isnan(
self.current_energy)):
if reinit_counter >= EnergyState.MAX_REINIT_COUNT:
init_error = False
message = (
'Stopping algorithm because function '
'create NaN or (+/-) infinity values even with '
'trying new random parameters'
)
raise ValueError(message)
self.current_location = self.lower + rand_state.random_sample(
self.lower.size) * (self.upper - self.lower)
reinit_counter += 1
else:
init_error = False
# If first time reset, initialize ebest and xbest
if self.ebest is None and self.xbest is None:
self.ebest = self.current_energy
self.xbest = np.copy(self.current_location)
# Otherwise, we keep them in case of reannealing reset
def update_best(self, e, x, context):
self.ebest = e
self.xbest = np.copy(x)
if self.callback is not None:
val = self.callback(x, e, context)
if val is not None:
if val:
return('Callback function requested to stop early by '
'returning True')
def update_current(self, e, x):
self.current_energy = e
self.current_location = np.copy(x)
class StrategyChain(object):
"""
Class that implements within a Markov chain the strategy for location
acceptance and local search decision making.
Parameters
----------
acceptance_param : float
Parameter for acceptance distribution. It is used to control the
probability of acceptance. The lower the acceptance parameter, the
smaller the probability of acceptance. Default value is -5.0 with
a range (-1e4, -5].
visit_dist : VisitingDistribution
Instance of `VisitingDistribution` class.
func_wrapper : ObjectiveFunWrapper
Instance of `ObjectiveFunWrapper` class.
minimizer_wrapper: LocalSearchWrapper
Instance of `LocalSearchWrapper` class.
rand_state : `~numpy.random.mtrand.RandomState` object
A `~numpy.random.mtrand.RandomState` object for using the current state
of the created random generator container.
energy_state: EnergyState
Instance of `EnergyState` class.
"""
def __init__(self, acceptance_param, visit_dist, func_wrapper,
minimizer_wrapper, rand_state, energy_state):
# Local strategy chain minimum energy and location
self.emin = energy_state.current_energy
self.xmin = np.array(energy_state.current_location)
# Global optimizer state
self.energy_state = energy_state
# Acceptance parameter
self.acceptance_param = acceptance_param
# Visiting distribution instance
self.visit_dist = visit_dist
# Wrapper to objective function
self.func_wrapper = func_wrapper
# Wrapper to the local minimizer
self.minimizer_wrapper = minimizer_wrapper
self.not_improved_idx = 0
self.not_improved_max_idx = 1000
self._rand_state = rand_state
self.temperature_step = 0
self.K = 100 * len(energy_state.current_location)
def accept_reject(self, j, e, x_visit):
r = self._rand_state.random_sample()
pqv_temp = (self.acceptance_param - 1.0) * (
e - self.energy_state.current_energy) / (
self.temperature_step + 1.)
if pqv_temp <= 0.:
pqv = 0.
else:
pqv = np.exp(np.log(pqv_temp) / (
1. - self.acceptance_param))
if r <= pqv:
# We accept the new location and update state
self.energy_state.update_current(e, x_visit)
self.xmin = np.copy(self.energy_state.current_location)
# No improvement for a long time
if self.not_improved_idx >= self.not_improved_max_idx:
if j == 0 or self.energy_state.current_energy < self.emin:
self.emin = self.energy_state.current_energy
self.xmin = np.copy(self.energy_state.current_location)
def run(self, step, temperature):
self.temperature_step = temperature / float(step + 1)
self.not_improved_idx += 1
for j in range(self.energy_state.current_location.size * 2):
if j == 0:
if step == 0:
self.energy_state_improved = True
else:
self.energy_state_improved = False
x_visit = self.visit_dist.visiting(
self.energy_state.current_location, j, temperature)
# Calling the objective function
e = self.func_wrapper.fun(x_visit)
if e < self.energy_state.current_energy:
# We have got a better energy value
self.energy_state.update_current(e, x_visit)
if e < self.energy_state.ebest:
val = self.energy_state.update_best(e, x_visit, 0)
if val is not None:
if val:
return val
self.energy_state_improved = True
self.not_improved_idx = 0
else:
# We have not improved but do we accept the new location?
self.accept_reject(j, e, x_visit)
if self.func_wrapper.nfev >= self.func_wrapper.maxfun:
return ('Maximum number of function call reached '
'during annealing')
# End of StrategyChain loop
def local_search(self):
# Decision making for performing a local search
# based on strategy chain results
# If energy has been improved or no improvement since too long,
# performing a local search with the best strategy chain location
if self.energy_state_improved:
# Global energy has improved, let's see if LS improves further
e, x = self.minimizer_wrapper.local_search(self.energy_state.xbest,
self.energy_state.ebest)
if e < self.energy_state.ebest:
self.not_improved_idx = 0
val = self.energy_state.update_best(e, x, 1)
if val is not None:
if val:
return val
self.energy_state.update_current(e, x)
if self.func_wrapper.nfev >= self.func_wrapper.maxfun:
return ('Maximum number of function call reached '
'during local search')
# Check probability of a need to perform a LS even if no improvement
do_ls = False
if self.K < 90 * len(self.energy_state.current_location):
pls = np.exp(self.K * (
self.energy_state.ebest - self.energy_state.current_energy) /
self.temperature_step)
if pls >= self._rand_state.random_sample():
do_ls = True
# Global energy not improved, let's see what LS gives
# on the best strategy chain location
if self.not_improved_idx >= self.not_improved_max_idx:
do_ls = True
if do_ls:
e, x = self.minimizer_wrapper.local_search(self.xmin, self.emin)
self.xmin = np.copy(x)
self.emin = e
self.not_improved_idx = 0
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