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agriconnect / numpy   python

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/ lib / tests / test_arraysetops.py

"""Test functions for 1D array set operations.

"""
from __future__ import division, absolute_import, print_function

import numpy as np

from numpy.testing import (assert_array_equal, assert_equal,
                           assert_raises, assert_raises_regex)
from numpy.lib.arraysetops import (
    ediff1d, intersect1d, setxor1d, union1d, setdiff1d, unique, in1d, isin
    )
import pytest



class TestSetOps(object):

    def test_intersect1d(self):
        # unique inputs
        a = np.array([5, 7, 1, 2])
        b = np.array([2, 4, 3, 1, 5])

        ec = np.array([1, 2, 5])
        c = intersect1d(a, b, assume_unique=True)
        assert_array_equal(c, ec)

        # non-unique inputs
        a = np.array([5, 5, 7, 1, 2])
        b = np.array([2, 1, 4, 3, 3, 1, 5])

        ed = np.array([1, 2, 5])
        c = intersect1d(a, b)
        assert_array_equal(c, ed)
        assert_array_equal([], intersect1d([], []))

    def test_intersect1d_array_like(self):
        # See gh-11772
        class Test(object):
            def __array__(self):
                return np.arange(3)

        a = Test()
        res = intersect1d(a, a)
        assert_array_equal(res, a)
        res = intersect1d([1, 2, 3], [1, 2, 3])
        assert_array_equal(res, [1, 2, 3])

    def test_intersect1d_indices(self):
        # unique inputs
        a = np.array([1, 2, 3, 4])
        b = np.array([2, 1, 4, 6])
        c, i1, i2 = intersect1d(a, b, assume_unique=True, return_indices=True)
        ee = np.array([1, 2, 4])
        assert_array_equal(c, ee)
        assert_array_equal(a[i1], ee)
        assert_array_equal(b[i2], ee)

        # non-unique inputs
        a = np.array([1, 2, 2, 3, 4, 3, 2])
        b = np.array([1, 8, 4, 2, 2, 3, 2, 3])
        c, i1, i2 = intersect1d(a, b, return_indices=True)
        ef = np.array([1, 2, 3, 4])
        assert_array_equal(c, ef)
        assert_array_equal(a[i1], ef)
        assert_array_equal(b[i2], ef)

        # non1d, unique inputs
        a = np.array([[2, 4, 5, 6], [7, 8, 1, 15]])
        b = np.array([[3, 2, 7, 6], [10, 12, 8, 9]])
        c, i1, i2 = intersect1d(a, b, assume_unique=True, return_indices=True)
        ui1 = np.unravel_index(i1, a.shape)
        ui2 = np.unravel_index(i2, b.shape)
        ea = np.array([2, 6, 7, 8])
        assert_array_equal(ea, a[ui1])
        assert_array_equal(ea, b[ui2])

        # non1d, not assumed to be uniqueinputs
        a = np.array([[2, 4, 5, 6, 6], [4, 7, 8, 7, 2]])
        b = np.array([[3, 2, 7, 7], [10, 12, 8, 7]])
        c, i1, i2 = intersect1d(a, b, return_indices=True)
        ui1 = np.unravel_index(i1, a.shape)
        ui2 = np.unravel_index(i2, b.shape)
        ea = np.array([2, 7, 8])
        assert_array_equal(ea, a[ui1])
        assert_array_equal(ea, b[ui2])

    def test_setxor1d(self):
        a = np.array([5, 7, 1, 2])
        b = np.array([2, 4, 3, 1, 5])

        ec = np.array([3, 4, 7])
        c = setxor1d(a, b)
        assert_array_equal(c, ec)

        a = np.array([1, 2, 3])
        b = np.array([6, 5, 4])

        ec = np.array([1, 2, 3, 4, 5, 6])
        c = setxor1d(a, b)
        assert_array_equal(c, ec)

        a = np.array([1, 8, 2, 3])
        b = np.array([6, 5, 4, 8])

        ec = np.array([1, 2, 3, 4, 5, 6])
        c = setxor1d(a, b)
        assert_array_equal(c, ec)

        assert_array_equal([], setxor1d([], []))

    def test_ediff1d(self):
        zero_elem = np.array([])
        one_elem = np.array([1])
        two_elem = np.array([1, 2])

        assert_array_equal([], ediff1d(zero_elem))
        assert_array_equal([0], ediff1d(zero_elem, to_begin=0))
        assert_array_equal([0], ediff1d(zero_elem, to_end=0))
        assert_array_equal([-1, 0], ediff1d(zero_elem, to_begin=-1, to_end=0))
        assert_array_equal([], ediff1d(one_elem))
        assert_array_equal([1], ediff1d(two_elem))
        assert_array_equal([7,1,9], ediff1d(two_elem, to_begin=7, to_end=9))
        assert_array_equal([5,6,1,7,8], ediff1d(two_elem, to_begin=[5,6], to_end=[7,8]))
        assert_array_equal([1,9], ediff1d(two_elem, to_end=9))
        assert_array_equal([1,7,8], ediff1d(two_elem, to_end=[7,8]))
        assert_array_equal([7,1], ediff1d(two_elem, to_begin=7))
        assert_array_equal([5,6,1], ediff1d(two_elem, to_begin=[5,6]))

    @pytest.mark.parametrize("ary, prepend, append", [
        # should fail because trying to cast
        # np.nan standard floating point value
        # into an integer array:
        (np.array([1, 2, 3], dtype=np.int64),
         None,
         np.nan),
        # should fail because attempting
        # to downcast to smaller int type:
        (np.array([1, 2, 3], dtype=np.int16),
         np.array([5, 1<<20, 2], dtype=np.int32),
         None),
        # should fail because attempting to cast
        # two special floating point values
        # to integers (on both sides of ary):
        (np.array([1., 3., 9.], dtype=np.int8),
         np.nan,
         np.nan),
         ])
    def test_ediff1d_forbidden_type_casts(self, ary, prepend, append):
        # verify resolution of gh-11490

        # specifically, raise an appropriate
        # Exception when attempting to append or
        # prepend with an incompatible type
        msg = 'cannot convert'
        with assert_raises_regex(ValueError, msg):
            ediff1d(ary=ary,
                    to_end=append,
                    to_begin=prepend)

    @pytest.mark.parametrize("ary,"
                             "prepend,"
                             "append,"
                             "expected", [
        (np.array([1, 2, 3], dtype=np.int16),
         0,
         None,
         np.array([0, 1, 1], dtype=np.int16)),
        (np.array([1, 2, 3], dtype=np.int32),
         0,
         0,
         np.array([0, 1, 1, 0], dtype=np.int32)),
        (np.array([1, 2, 3], dtype=np.int64),
         3,
         -9,
         np.array([3, 1, 1, -9], dtype=np.int64)),
         ])
    def test_ediff1d_scalar_handling(self,
                                     ary,
                                     prepend,
                                     append,
                                     expected):
        # maintain backwards-compatibility
        # of scalar prepend / append behavior
        # in ediff1d following fix for gh-11490
        actual = np.ediff1d(ary=ary,
                            to_end=append,
                            to_begin=prepend)
        assert_equal(actual, expected)


    def test_isin(self):
        # the tests for in1d cover most of isin's behavior
        # if in1d is removed, would need to change those tests to test
        # isin instead.
        def _isin_slow(a, b):
            b = np.asarray(b).flatten().tolist()
            return a in b
        isin_slow = np.vectorize(_isin_slow, otypes=[bool], excluded={1})
        def assert_isin_equal(a, b):
            x = isin(a, b)
            y = isin_slow(a, b)
            assert_array_equal(x, y)

        #multidimensional arrays in both arguments
        a = np.arange(24).reshape([2, 3, 4])
        b = np.array([[10, 20, 30], [0, 1, 3], [11, 22, 33]])
        assert_isin_equal(a, b)

        #array-likes as both arguments
        c = [(9, 8), (7, 6)]
        d = (9, 7)
        assert_isin_equal(c, d)

        #zero-d array:
        f = np.array(3)
        assert_isin_equal(f, b)
        assert_isin_equal(a, f)
        assert_isin_equal(f, f)

        #scalar:
        assert_isin_equal(5, b)
        assert_isin_equal(a, 6)
        assert_isin_equal(5, 6)

        #empty array-like:
        x = []
        assert_isin_equal(x, b)
        assert_isin_equal(a, x)
        assert_isin_equal(x, x)

    def test_in1d(self):
        # we use two different sizes for the b array here to test the
        # two different paths in in1d().
        for mult in (1, 10):
            # One check without np.array to make sure lists are handled correct
            a = [5, 7, 1, 2]
            b = [2, 4, 3, 1, 5] * mult
            ec = np.array([True, False, True, True])
            c = in1d(a, b, assume_unique=True)
            assert_array_equal(c, ec)

            a[0] = 8
            ec = np.array([False, False, True, True])
            c = in1d(a, b, assume_unique=True)
            assert_array_equal(c, ec)

            a[0], a[3] = 4, 8
            ec = np.array([True, False, True, False])
            c = in1d(a, b, assume_unique=True)
            assert_array_equal(c, ec)

            a = np.array([5, 4, 5, 3, 4, 4, 3, 4, 3, 5, 2, 1, 5, 5])
            b = [2, 3, 4] * mult
            ec = [False, True, False, True, True, True, True, True, True,
                  False, True, False, False, False]
            c = in1d(a, b)
            assert_array_equal(c, ec)

            b = b + [5, 5, 4] * mult
            ec = [True, True, True, True, True, True, True, True, True, True,
                  True, False, True, True]
            c = in1d(a, b)
            assert_array_equal(c, ec)

            a = np.array([5, 7, 1, 2])
            b = np.array([2, 4, 3, 1, 5] * mult)
            ec = np.array([True, False, True, True])
            c = in1d(a, b)
            assert_array_equal(c, ec)

            a = np.array([5, 7, 1, 1, 2])
            b = np.array([2, 4, 3, 3, 1, 5] * mult)
            ec = np.array([True, False, True, True, True])
            c = in1d(a, b)
            assert_array_equal(c, ec)

            a = np.array([5, 5])
            b = np.array([2, 2] * mult)
            ec = np.array([False, False])
            c = in1d(a, b)
            assert_array_equal(c, ec)

        a = np.array([5])
        b = np.array([2])
        ec = np.array([False])
        c = in1d(a, b)
        assert_array_equal(c, ec)

        assert_array_equal(in1d([], []), [])

    def test_in1d_char_array(self):
        a = np.array(['a', 'b', 'c', 'd', 'e', 'c', 'e', 'b'])
        b = np.array(['a', 'c'])

        ec = np.array([True, False, True, False, False, True, False, False])
        c = in1d(a, b)

        assert_array_equal(c, ec)

    def test_in1d_invert(self):
        "Test in1d's invert parameter"
        # We use two different sizes for the b array here to test the
        # two different paths in in1d().
        for mult in (1, 10):
            a = np.array([5, 4, 5, 3, 4, 4, 3, 4, 3, 5, 2, 1, 5, 5])
            b = [2, 3, 4] * mult
            assert_array_equal(np.invert(in1d(a, b)), in1d(a, b, invert=True))

    def test_in1d_ravel(self):
        # Test that in1d ravels its input arrays. This is not documented
        # behavior however. The test is to ensure consistentency.
        a = np.arange(6).reshape(2, 3)
        b = np.arange(3, 9).reshape(3, 2)
        long_b = np.arange(3, 63).reshape(30, 2)
        ec = np.array([False, False, False, True, True, True])

        assert_array_equal(in1d(a, b, assume_unique=True), ec)
        assert_array_equal(in1d(a, b, assume_unique=False), ec)
        assert_array_equal(in1d(a, long_b, assume_unique=True), ec)
        assert_array_equal(in1d(a, long_b, assume_unique=False), ec)

    def test_in1d_first_array_is_object(self):
        ar1 = [None]
        ar2 = np.array([1]*10)
        expected = np.array([False])
        result = np.in1d(ar1, ar2)
        assert_array_equal(result, expected)

    def test_in1d_second_array_is_object(self):
        ar1 = 1
        ar2 = np.array([None]*10)
        expected = np.array([False])
        result = np.in1d(ar1, ar2)
        assert_array_equal(result, expected)

    def test_in1d_both_arrays_are_object(self):
        ar1 = [None]
        ar2 = np.array([None]*10)
        expected = np.array([True])
        result = np.in1d(ar1, ar2)
        assert_array_equal(result, expected)

    def test_in1d_both_arrays_have_structured_dtype(self):
        # Test arrays of a structured data type containing an integer field
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